QuasiSeq: Analyzing RNA Sequence Count Tables Using Quasi-likelihood

Identify differentially expressed genes in RNA-seq count data using quasi-Poisson or quasi-negative binomial models with QL, QLShrink and QLSpline methods (Lund, Nettleton, McCarthy, and Smyth, 2012).

Version: 1.0-6
Depends: R (≥ 3.1.2)
Imports: edgeR, Matrix, mgcv
Published: 2015-02-03
Author: Steve Lund and Long Qu
Maintainer: Steve Lund <lundsp at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: QuasiSeq results

Downloads:

Reference manual: QuasiSeq.pdf
Package source: QuasiSeq_1.0-6.tar.gz
Windows binaries: r-devel: QuasiSeq_1.0-6.zip, r-release: QuasiSeq_1.0-6.zip, r-oldrel: QuasiSeq_1.0-6.zip
OS X Snow Leopard binaries: r-release: not available, r-oldrel: QuasiSeq_1.0-6.tgz
OS X Mavericks binaries: r-release: QuasiSeq_1.0-6.tgz
Old sources: QuasiSeq archive