QuasiSeq: Analyzing RNA sequence count tables using quasi-likelihood

This package is used to apply the QL, QLShrink and QLSpline methods (Lund, Nettleton, McCarthy, and Smyth, 2012) to quasi-Poisson or quasi-negative binomial models for identifying differentially expressed genes in RNA-seq data.

Version: 1.0-4
Depends: R (≥ 3.0.2)
Imports: edgeR, Matrix, mgcv
Published: 2014-04-14
Author: Steve Lund and Long Qu
Maintainer: Steve Lund <lundsp at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: QuasiSeq results


Reference manual: QuasiSeq.pdf
Package source: QuasiSeq_1.0-4.tar.gz
OS X binary: QuasiSeq_1.0-4.tgz
Windows binary: QuasiSeq_1.0-4.zip
Old sources: QuasiSeq archive