CRAN Package Check Results for Package bioOED

Last updated on 2021-12-03 19:50:04 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.1 13.55 137.77 151.32 NOTE
r-devel-linux-x86_64-debian-gcc 0.2.1 11.64 91.58 103.22 ERROR
r-devel-linux-x86_64-fedora-clang 0.2.1 198.41 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2.1 173.69 NOTE
r-devel-windows-x86_64-new-UL 0.2.1 29.00 191.00 220.00 NOTE
r-devel-windows-x86_64-new-TK 0.2.1 NOTE
r-devel-windows-x86_64-old 0.2.1 22.00 128.00 150.00 NOTE
r-patched-linux-x86_64 0.2.1 19.61 134.11 153.72 NOTE
r-release-linux-x86_64 0.2.1 15.06 133.67 148.73 NOTE
r-release-macos-arm64 0.2.1 ERROR
r-release-macos-x86_64 0.2.1 NOTE
r-release-windows-ix86+x86_64 0.2.1 34.00 169.00 203.00 NOTE
r-oldrel-macos-x86_64 0.2.1 OK
r-oldrel-windows-ix86+x86_64 0.2.1 34.00 172.00 206.00 OK

Check Details

Version: 0.2.1
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK, r-devel-windows-x86_64-old, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Version: 0.2.1
Check: examples
Result: ERROR
    Running examples in ‘bioOED-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: calculate_pars_correlation
    > ### Title: Correlation Between Model Parameters Sensitivities
    > ### Aliases: calculate_pars_correlation
    >
    > ### ** Examples
    >
    >
    > parms_fix <- c(temp_ref = 57.5)
    > parms <- c(delta_ref = 3.9, z = 4.2, p = 1, N0 = 1e6)
    > temp_profile <- data.frame(time = c(0, 60), temperature = c(30, 60))
    > correlations <- calculate_pars_correlation("Mafart", parms,
    + temp_profile, parms_fix)
    Warning: `mutate_()` was deprecated in dplyr 0.7.0.
    Please use `mutate()` instead.
    See vignette('programming') for more help
    This warning is displayed once every 8 hours.
    Call `lifecycle::last_lifecycle_warnings()` to see where this warning was generated.
    Error in Sens[, i] <- (yPert - yRef)/dp[i] * parscale[i]/varscale :
     incorrect number of subscripts on matrix
    Calls: calculate_pars_correlation -> sensitivity_inactivation -> sensFun
    Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.2.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘vignette_bioOED.Rmd’ using rmarkdown
    Quitting from lines 100-103 (vignette_bioOED.Rmd)
    Error: processing vignette ‘vignette_bioOED.Rmd’ failed with diagnostics:
    incorrect number of subscripts on matrix
    --- failed re-building ‘vignette_bioOED.Rmd’
    
    --- re-building ‘vignette_bioOED_isothermal.Rmd’ using rmarkdown
    --- finished re-building ‘vignette_bioOED_isothermal.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘vignette_bioOED.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.2.1
Check: package dependencies
Result: ERROR
    Package required but not available: ‘MEIGOR’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-macos-arm64