CRAN Package Check Results for Package rbiom

Last updated on 2022-09-27 23:08:49 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.3 53.84 52.58 106.42 OK
r-devel-linux-x86_64-debian-gcc 1.0.3 44.57 40.90 85.47 OK
r-devel-linux-x86_64-fedora-clang 1.0.3 175.46 OK
r-devel-linux-x86_64-fedora-gcc 1.0.3 151.94 OK
r-devel-windows-x86_64 1.0.3 58.00 605.00 663.00 OK
r-patched-linux-x86_64 1.0.3 49.05 50.45 99.50 OK
r-release-linux-x86_64 1.0.3 47.22 50.11 97.33 OK
r-release-macos-arm64 1.0.3 40.00 NOTE
r-release-macos-x86_64 1.0.3 56.00 OK
r-release-windows-x86_64 1.0.3 55.00 0.00 55.00 FAIL
r-oldrel-macos-arm64 1.0.3 40.00 OK
r-oldrel-macos-x86_64 1.0.3 55.00 OK
r-oldrel-windows-ix86+x86_64 1.0.3 145.00 175.00 320.00 OK

Check Details

Version: 1.0.3
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘rhdf5’
Flavor: r-release-macos-arm64

Version: 1.0.3
Check: examples
Result: FAIL
    Check process probably crashed or hung up for 20 minutes ... killed
    Most likely this happened in the example checks (?),
    if not, ignore the following last lines of example output:
    >
    > infile <- system.file("extdata", "hmp50.bz2", package = "rbiom")
    > biom <- read.biom(infile)
    >
    > metadata(biom)[1:4,1:3]
     Age BMI Body Site
    HMP01 22 20 Buccal mucosa
    HMP02 24 23 Buccal mucosa
    HMP03 28 26 Saliva
    HMP04 25 23 Saliva
    >
    >
    >
    >
    > cleanEx()
    > nameEx("nsamples")
    > ### * nsamples
    >
    > flush(stderr()); flush(stdout())
    >
    > ### Name: nsamples
    > ### Title: Number of samples in a BIOM.
    > ### Aliases: nsamples
    >
    > ### ** Examples
    >
    > library(rbiom)
    >
    > infile <- system.file("extdata", "hmp50.bz2", package = "rbiom")
    > biom <- read.biom(infile)
    ======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-release-windows-x86_64