CRAN Package Check Results for Package sdcLog

Last updated on 2023-12-10 19:49:25 CET.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	0.5.0	6.06	76.76	82.82	ERROR
r-devel-linux-x86_64-debian-gcc	0.5.0	4.74	62.29	67.03	OK
r-devel-linux-x86_64-fedora-clang	0.5.0			113.42	OK
r-devel-linux-x86_64-fedora-gcc	0.5.0			115.66	OK
r-devel-windows-x86_64	0.5.0	7.00	88.00	95.00	OK
r-patched-linux-x86_64	0.5.0	6.95	79.29	86.24	OK
r-release-linux-x86_64	0.5.0	4.19	77.31	81.50	OK
r-release-macos-arm64	0.5.0			48.00	OK
r-release-macos-x86_64	0.5.0			74.00	OK
r-release-windows-x86_64	0.5.0	7.00	98.00	105.00	OK
r-oldrel-macos-arm64	0.5.0			35.00	OK
r-oldrel-macos-x86_64	0.5.0			62.00	OK
r-oldrel-windows-x86_64	0.5.0	8.00	103.00	111.00	OK

Check Details

Version: 0.5.0
Check: examples
Result: ERROR Running examples in ‘sdcLog-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: sdc_descriptives > ### Title: Disclosure control for descriptive statistics > ### Aliases: sdc_descriptives > > ### ** Examples > > sdc_descriptives( + data = sdc_descriptives_DT, + id_var = "id", + val_var = "val_1" + ) Error in `[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), : 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Calls: sdc_descriptives -> check_dominance -> [ -> [.data.table Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.5.0
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/1s] Running ‘testthat.R’ [13s/18s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(sdcLog) > > test_check("sdcLog") > 1 + 1 [1] 2 > sdc_log(script_2, conn, append = TRUE) Log file for 'script_2.R' written to 'file connection'. [ FAIL 17 | WARN 5 | SKIP 0 | PASS 170 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-sdc_descriptives.R:26:3'): sdc_descriptives works in simple cases ── Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::expect_equal(...) at test-sdc_descriptives.R:26:3 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─sdcLog::sdc_descriptives(sdc_descriptives_DT, "id", "val_1") 5. └─sdcLog:::check_dominance(data, id_var, val_var, by) 6. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by] 7. └─data.table:::`[.data.table`(...) ── Error ('test-sdc_descriptives.R:181:3'): zeros are handles correctly ──────── Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::expect_message(...) at test-sdc_descriptives.R:181:3 2. │ └─testthat:::expect_condition_matching(...) 3. │ └─testthat:::quasi_capture(...) 4. │ ├─testthat (local) .capture(...) 5. │ │ └─base::withCallingHandlers(...) 6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. ├─testthat::expect_equal(...) 8. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 9. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 10. └─sdcLog::sdc_descriptives(sdc_descriptives_DT, "id", "val_2") 11. └─sdcLog:::check_dominance(data, id_var, val_var, by) 12. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by] 13. └─data.table:::`[.data.table`(...) ── Error ('test-sdc_descriptives.R:314:3'): missing ID's are handled correctly (simple case) ── Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::expect_warning(...) at test-sdc_descriptives.R:314:3 2. │ └─testthat:::expect_condition_matching(...) 3. │ └─testthat:::quasi_capture(...) 4. │ ├─testthat (local) .capture(...) 5. │ │ └─base::withCallingHandlers(...) 6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. ├─testthat::expect_equal(...) 8. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 9. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 10. └─sdcLog::sdc_descriptives(DT_filled[seq(2, 20, 2)], "id_na", "val_1") 11. └─sdcLog:::check_dominance(data, id_var, val_var, by) 12. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by] 13. └─data.table:::`[.data.table`(...) ── Error ('test-sdc_descriptives.R:493:3'): #77 is fixed ─────────────────────── Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::capture_warnings(...) at test-sdc_descriptives.R:493:3 2. │ └─base::withCallingHandlers(...) 3. ├─testthat::expect_equal(...) 4. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 5. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 6. └─sdcLog::sdc_descriptives(df, "id", val_var = "val") 7. └─sdcLog:::check_dominance(data, id_var, val_var, by) 8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by] 9. └─data.table:::`[.data.table`(...) ── Error ('test-sdc_extreme.R:33:5'): sdc_min_max() works in simple case ─────── Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:33:5 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─sdcLog::sdc_min_max(...) 5. └─sdcLog:::find_SD(...) 6. └─sdcLog:::find_SD_problems(...) 7. └─sdcLog:::check_dominance(SD, id_var, val_var, by) 8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by] 9. └─data.table:::`[.data.table`(...) ── Error ('test-sdc_extreme.R:58:5'): sdc_min_max() produces no result in case of sd_overlap due to dominance ── Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::expect_equal(...) at test-sdc_extreme.R:58:5 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_2") 5. └─sdcLog:::find_SD(...) 6. └─sdcLog:::find_SD_problems(...) 7. └─sdcLog:::check_dominance(SD, id_var, val_var, by) 8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by] 9. └─data.table:::`[.data.table`(...) ── Error ('test-sdc_extreme.R:84:5'): sdc_min_max() produces no result in case of sd_overlap ── Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:84:5 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_3") 5. └─sdcLog:::find_SD(...) 6. └─sdcLog:::find_SD_problems(...) 7. └─sdcLog:::check_dominance(SD, id_var, val_var, by) 8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by] 9. └─data.table:::`[.data.table`(...) ── Error ('test-sdc_extreme.R:254:5'): sdc_min_max() does not enter an infinite loop ── Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::expect_identical(...) at test-sdc_extreme.R:254:5 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─sdcLog::sdc_min_max(extreme_test_dt[1:5], "id", "val_2") 5. └─sdcLog:::find_SD(...) 6. └─sdcLog:::find_SD_problems(...) 7. └─sdcLog:::check_dominance(SD, id_var, val_var, by) 8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by] 9. └─data.table:::`[.data.table`(...) ── Failure ('test-sdc_log.R:27:5'): sdc_log() works correctly with log files ─── readLines(tf)[-exclude] (`actual`) not identical to gsub("✓", "v", readLines(log))[-exclude] (`expected`). actual[2:4] vs expected[2:28] "" "> data(\"sdc_descriptives_DT\")" "" "> sdc_descriptives(data = sdc_descriptives_DT, id_var = \"id\", val_var = \"val_1\")" + "-------------------------------------------------- SDC results (descriptives) --" + "OPTIONS: sdc.n_ids: 5 | sdc.n_ids_dominance: 2 | sdc.share_dominance: 0.85" + "SETTINGS: id_var: id | val_var: val_1 | zero_as_NA: FALSE" + "--------------------------------------------------------------------------------" + "" + "> data(\"sdc_min_max_DT\")" + "" and 17 more ... ── Failure ('test-sdc_log.R:28:5'): sdc_log() works correctly with log files ─── readLines\(tf\)\[exclude\] does not match "Output complies to RDC rules.". Actual values: * <NA> * <NA> Backtrace: ▆ 1. └─testthat::expect_match(readLines(tf)[exclude], "Output complies to RDC rules.") at test-sdc_log.R:28:5 2. └─testthat:::expect_match_(...) ── Failure ('test-sdc_log.R:46:5'): sdc_log() works correctly with connections ── readLines(tf_conn)[-exclude] (`actual`) not identical to gsub("✓", "v", readLines(log))[-exclude] (`expected`). actual[2:4] vs expected[2:28] "" "> data(\"sdc_descriptives_DT\")" "" "> sdc_descriptives(data = sdc_descriptives_DT, id_var = \"id\", val_var = \"val_1\")" + "-------------------------------------------------- SDC results (descriptives) --" + "OPTIONS: sdc.n_ids: 5 | sdc.n_ids_dominance: 2 | sdc.share_dominance: 0.85" + "SETTINGS: id_var: id | val_var: val_1 | zero_as_NA: FALSE" + "--------------------------------------------------------------------------------" + "" + "> data(\"sdc_min_max_DT\")" + "" and 17 more ... ── Failure ('test-sdc_log.R:47:5'): sdc_log() works correctly with connections ── readLines\(tf_conn\)\[exclude\] does not match "Output complies to RDC rules.". Actual values: * <NA> * <NA> Backtrace: ▆ 1. └─testthat::expect_match(readLines(tf_conn)[exclude], "Output complies to RDC rules.") at test-sdc_log.R:47:5 2. └─testthat:::expect_match_(...) ── Error ('test-sdc_min_max.R:33:5'): sdc_min_max() works in simple case ─────── Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:33:5 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─sdcLog::sdc_min_max(...) 5. └─sdcLog:::find_SD(...) 6. └─sdcLog:::find_SD_problems(...) 7. └─sdcLog:::check_dominance(SD, id_var, val_var, by) 8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by] 9. └─data.table:::`[.data.table`(...) ── Error ('test-sdc_min_max.R:58:5'): sdc_min_max() produces no result in case of sd_overlap due to dominance ── Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::expect_equal(...) at test-sdc_min_max.R:58:5 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_2") 5. └─sdcLog:::find_SD(...) 6. └─sdcLog:::find_SD_problems(...) 7. └─sdcLog:::check_dominance(SD, id_var, val_var, by) 8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by] 9. └─data.table:::`[.data.table`(...) ── Error ('test-sdc_min_max.R:84:5'): sdc_min_max() produces no result in case of sd_overlap ── Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:84:5 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─sdcLog::sdc_min_max(extreme_test_dt, "id", "val_3") 5. └─sdcLog:::find_SD(...) 6. └─sdcLog:::find_SD_problems(...) 7. └─sdcLog:::check_dominance(SD, id_var, val_var, by) 8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by] 9. └─data.table:::`[.data.table`(...) ── Error ('test-sdc_min_max.R:261:5'): sdc_min_max() does not enter an infinite loop ── Error in ``[.data.table`(dt, id_na == TRUE, list(value_share_na = value_share), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:261:5 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─sdcLog::sdc_min_max(extreme_test_dt[1:5], "id", "val_2") 5. └─sdcLog:::find_SD(...) 6. └─sdcLog:::find_SD_problems(...) 7. └─sdcLog:::check_dominance(SD, id_var, val_var, by) 8. ├─dt[id_na == TRUE, list(value_share_na = value_share), keyby = by] 9. └─data.table:::`[.data.table`(...) ── Error ('test-sdc_min_max.R:287:5'): argument fill_id_var works ────────────── Error in ``[.data.table`(data, i = !is.na(get(id_var)) & !is.na(get(val_var)), j = list(distinct_ids = data.table::uniqueN(get(id_var))), keyby = by)`: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) Backtrace: ▆ 1. ├─testthat::expect_identical(...) at test-sdc_min_max.R:287:5 2. │ └─testthat::quasi_label(enquo(object), label, arg = "object") 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. └─sdcLog::sdc_min_max(extreme_test_dt, "id_na", val_var = "val_1") 5. └─sdcLog:::find_SD(...) 6. └─sdcLog:::find_SD_problems(...) 7. └─sdcLog:::check_distinct_ids(SD, id_var, val_var, by) 8. ├─...[] 9. └─data.table:::`[.data.table`(...) [ FAIL 17 | WARN 5 | SKIP 0 | PASS 170 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.5.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘FAQ.Rmd’ using rmarkdown --- finished re-building ‘FAQ.Rmd’ --- re-building ‘intro.Rmd’ using rmarkdown Quitting from lines 115-116 [descriptives_simple] (intro.Rmd) Error: processing vignette 'intro.Rmd' failed with diagnostics: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) --- failed re-building ‘intro.Rmd’ --- re-building ‘options.Rmd’ using rmarkdown Quitting from lines 52-53 [example1_sdc.n_ids] (options.Rmd) Error: processing vignette 'options.Rmd' failed with diagnostics: 'by' or 'keyby' must evaluate to a vector or a list of vectors (where 'list' includes data.table and data.frame which are lists, too) --- failed re-building ‘options.Rmd’ SUMMARY: processing the following files failed: ‘intro.Rmd’ ‘options.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang