HybridMicrobiomes: Analysis of Host-Associated Microbiomes from Hybrid Organisms

A set of tools to analyze and visualize the relationships between host-associated microbiomes of hybrid organisms and those of their progenitor species. Though not necessary, installing the microViz package is recommended as a check for phyloseq objects. To install microViz from R Universe use the following command: install.packages("microViz", repos = c(davidbarnett = "https://david-barnett.r-universe.dev", getOption("repos"))). To install microViz from GitHub use the following commands: install.packages("devtools") followed by devtools::install_github("david-barnett/microViz").

Version: 0.1.1
Imports: rgl, compositions, rlang, PERMANOVA, graphics, stats, vegan, ks, ape, geometry, StereoMorph, phyloseq
Suggests: microViz
Published: 2023-12-05
Author: Benjamin Camper [aut], Zachary Lauglin [ctb], Daniel Malagon [ctb], Robert Denton [ctb], Sharon Bewick [aut, cre], National Science Foundation Division of Integrative Organismal Systems (award #2104605) [fnd], Clemson University Support for Early Exploration and Development (CU SEED) Grant [fnd]
Maintainer: Sharon Bewick <sbewick at clemson.edu>
License: GPL-2
NeedsCompilation: no
CRAN checks: HybridMicrobiomes results

Documentation:

Reference manual: HybridMicrobiomes.pdf

Downloads:

Package source: HybridMicrobiomes_0.1.1.tar.gz
Windows binaries: r-devel: HybridMicrobiomes_0.1.1.zip, r-release: HybridMicrobiomes_0.1.1.zip, r-oldrel: HybridMicrobiomes_0.1.1.zip
macOS binaries: r-release (arm64): not available, r-oldrel (arm64): HybridMicrobiomes_0.1.1.tgz, r-release (x86_64): not available
Old sources: HybridMicrobiomes archive

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