spathial: Evolutionary Analysis

A generic tool for manifold analysis. It allows to infer a relevant transition or evolutionary path which can highlights the features involved in a specific process. 'spathial' can be useful in all the scenarios where the temporal (or pseudo-temporal) evolution is the main problem (e.g. tumor progression). The algorithm for finding the principal path is described in: Ferrarotti et al., (2019) <doi:10.1109/TNNLS.2018.2884792>."

Version: 0.1.2
Depends: R (≥ 3.5)
Imports: pracma, igraph, matrixStats, MASS, Rtsne, class, utils, knitr, rmarkdown, irlba
Published: 2020-04-10
DOI: 10.32614/CRAN.package.spathial
Author: Erika Gardini [aut, cre], Federico M. Giorgi [aut], Sergio Decherchi [aut], Andrea Cavalli [aut]
Maintainer: Erika Gardini <erika.gardini4 at>
License: GPL-3
NeedsCompilation: no
CRAN checks: spathial results


Reference manual: spathial.pdf
Vignettes: Spathial Package Vignette


Package source: spathial_0.1.2.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): spathial_0.1.2.tgz, r-oldrel (arm64): spathial_0.1.2.tgz, r-release (x86_64): spathial_0.1.2.tgz, r-oldrel (x86_64): spathial_0.1.2.tgz
Old sources: spathial archive


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