stepdownfdp: A Step-Down Procedure to Control the False Discovery Proportion

Provides a step-down procedure for controlling the False Discovery Proportion (FDP) in a competition-based setup, implementing Dong et al. (2020) <doi:10.48550/arXiv.2011.11939>. Such setups include target-decoy competition (TDC) in computational mass spectrometry and the knockoff construction in linear regression.

Version: 1.0.0
Imports: pracma, stats
Published: 2022-03-16
DOI: 10.32614/CRAN.package.stepdownfdp
Author: Arya Ebadi [aut, cre], Dong Luo [aut], Kristen Emery [aut], Yilun He [aut], William Stafford Noble [aut], Uri Keich ORCID iD [aut]
Maintainer: Arya Ebadi <aeba3842 at>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: README
CRAN checks: stepdownfdp results


Reference manual: stepdownfdp.pdf


Package source: stepdownfdp_1.0.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): stepdownfdp_1.0.0.tgz, r-oldrel (arm64): stepdownfdp_1.0.0.tgz, r-release (x86_64): stepdownfdp_1.0.0.tgz, r-oldrel (x86_64): stepdownfdp_1.0.0.tgz


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